PairingAndScaffolding.pl Command

PairingAndScaffolding.pl

scaffolding pre-assembled contigs after extension

Maintainer: Debian Med Packaging Team

Email: [email protected] .

Website: https://github.com/nsoranzo/sspace_basic

Section: science

Install PairingAndScaffolding.pl

Debian apt-get install sspace Click to copy
Ubuntu apt-get install sspace Click to copy
Kali Linux apt-get install sspace Click to copy
Raspbian apt-get install sspace Click to copy

sspace

scaffolding pre-assembled contigs after extension

SSAKE-based Scaffolding of Pre-Assembled Contigs after Extension (SSPACE) is a script able to extend and scaffold pre-assembled contigs using one or more mate pairs or paired-end libraries, or even a combination. SSPACE is built based on SSAKE. Code of SSAKE is changed to be able to extend and scaffold pre-assembled contigs for multiple paired reads libraries. This is the free 'basic' version of SSPACE. The non-free 'standard' version is available directly from Baseclear.

Installing PairingAndScaffolding.pl command is simple. just copy one of the above commands for your operating system and paste it into terminal. This command is available for Debian, Ubuntu, Kali and Raspbian operating systems. Once you run the command it will install the latest version of PairingAndScaffolding.pl 2026 package in your OS.