Nanook_get_read_stats.pl Command

nanook_get_read_stats.pl

pre- and post-alignment analysis of nanopore sequencing data

Maintainer: Debian Med Packaging Team

Email: [email protected] .

Website: https://documentation.tgac.ac.uk/display/NANOOK/NanoOK

Section: science

Install nanook_get_read_stats.pl

Debian apt-get install nanook Click to copy
Ubuntu apt-get install nanook Click to copy
Kali Linux apt-get install nanook Click to copy

nanook

pre- and post-alignment analysis of nanopore sequencing data

NanoOK is a flexible, multi-reference software for pre- and post- alignment analysis of nanopore sequencing data, quality and error profiles. NanoOK (pronounced na-nook) is a tool for extraction, alignment and analysis of Nanopore reads. NanoOK will extract reads as FASTA or FASTQ files, align them (with a choice of alignment tools), then generate a comprehensive multi-page PDF report containing yield, accuracy and quality analysis. Along the way, it generates plain text files which can be used for further analysis, as well as graphs suitable for inclusion in presentations and papers.

Installation of latest nanook_get_read_stats.pl command is available for Debian, Ubuntu and Kali. You can copy the command for your OS from above and paste it into your terminal. Once you run the command it will download the 2024 latest package from the repository and install it in your computer/server.