MaRaClusterAdapter Command

MaRaClusterAdapter

set of programs implementing The OpenMS Proteomic Pipeline

Maintainer: The Debichem Group

Email: [email protected] .

Website: http://www.openms.de

Section: science

Install MaRaClusterAdapter

Debian apt-get install topp Click to copy
Ubuntu apt-get install topp Click to copy
Kali Linux apt-get install topp Click to copy
Fedora dnf install openms-tools Click to copy
Raspbian apt-get install topp Click to copy

topp

set of programs implementing The OpenMS Proteomic Pipeline

TOPP (the OpenMS proteomic pipeline) is a pipeline for the analysis of HPLC/MS data. It consists of a set of numerous small applications that can be chained together to create analysis pipelines tailored for a specific problem. The applications make use of the libopenms library. Some examples of these applications are : - TOPPView: A viewer for mass spectrometry data. - TOPPAS: An assistant for GUI-driven TOPP workflow design. - DTAExtractor: Extracts spectra of an MS run file to several files in DTA format. - FileConverter: Converts between different MS file formats. - FileFilter: Extracts or manipulates portions of data from peak, feature or consensus feature files. - SpectraMerger: Merges spectra from an LC/MS map, either by precursor or by RT blocks. - BaselineFilter: Removes the baseline from profile spectra using a top-hat filter. - InternalCalibration: Applies an internal calibration. - PTModel: Trains a model for the prediction of proteotypic peptides from a training set. - RTPredict: Predicts retention times for peptides using a model trained by RTModel. - ExecutePipeline: Executes workflows created by TOPPAS.

openms-tools

OpenMS tools

Install the latest version of MaRaClusterAdapter in Debian, Ubuntu, Kali, Fedora and Raspbian from terminal. To install the MaRaClusterAdapter just copy the above command for your OS and run into terminal. After you run the command it will grab the latest version of MaRaClusterAdapter from the respository and install it in your computer/server.