Mafft-sparsecore.rb Command

Mafft-sparsecore.rb Command

mafft-sparsecore.rb

Multiple alignment program for amino acid or nucleotide sequences

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Maintainer: Debian Med Packaging Team
Email: [email protected] .
Website: http://mafft.cbrc.jp/alignment/software/
Section: science

Install mafft-sparsecore.rb

  • Debian apt-get install mafft Click to copy
  • Ubuntu apt-get install mafft Click to copy
  • Kali Linux apt-get install mafft Click to copy
  • Raspbian apt-get install mafft Click to copy
  • macOS brew install mafft Click to copy

mafft

Multiple alignment program for amino acid or nucleotide sequences

MAFFT is a multiple sequence alignment program which offers three accuracy-oriented methods: * L-INS-i (probably most accurate; recommended for <200 sequences; iterative refinement method incorporating local pairwise alignment information), * G-INS-i (suitable for sequences of similar lengths; recommended for <200 sequences; iterative refinement method incorporating global pairwise alignment information), * E-INS-i (suitable for sequences containing large unalignable regions; recommended for <200 sequences), and five speed-oriented methods: * FFT-NS-i (iterative refinement method; two cycles only), * FFT-NS-i (iterative refinement method; max. 1000 iterations), * FFT-NS-2 (fast; progressive method), * FFT-NS-1 (very fast; recommended for >2000 sequences; progressive method with a rough guide tree), * NW-NS-PartTree-1 (recommended for u223c50,000 sequences; progressive method with the PartTree algorithm).

Installation of latest mafft-sparsecore.rb command is available for Debian, Ubuntu, Kali, Raspbian and macOS. You can copy the command for your OS from above and paste it into your terminal. Once you run the command it will download the 2026 latest package from the repository and install it in your computer/server.