Install Miniasm On A Debian, Ubuntu, Kali And Raspbian

Install Miniasm On A Debian, Ubuntu, Kali And Raspbian

miniasm

ultrafast de novo assembler for long noisy DNA sequencing reads

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Maintainer: Debian Med Packaging Team
Email: [email protected] .
Website: https://github.com/lh3/miniasm
Section: science

Install miniasm

  • Debian apt-get install miniasm Click to copy
  • Ubuntu apt-get install miniasm Click to copy
  • Kali Linux apt-get install miniasm Click to copy
  • Raspbian apt-get install miniasm Click to copy

miniasm

ultrafast de novo assembler for long noisy DNA sequencing reads

Miniasm is an experimental very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream assemblers, miniasm does not have a consensus step. It simply concatenates pieces of read sequences to generate the final unitig sequences. Thus the per-base error rate is similar to the raw input reads.

Install the latest version of miniasm in Debian, Ubuntu, Kali and Raspbian from terminal. To install the miniasm just copy the above command for your OS and run into terminal. After you run the command it will grab the latest version of miniasm from the respository and install it in your computer/server.