Install Gfadiff On A Debian, Ubuntu, Kali And Raspbian

Install Gfadiff On A Debian, Ubuntu, Kali And Raspbian

gfadiff

parse, edit and write GFA format graphs in Ruby

Learn Laravel, React, VueJS and Python
read programming books
Maintainer: Debian Med Packaging Team
Email: [email protected] .
Website: https://github.com/ggonnella/rgfa
Section: science

Install gfadiff

  • Debian apt-get install ruby-rgfa Click to copy
  • Ubuntu apt-get install ruby-rgfa Click to copy
  • Kali Linux apt-get install ruby-rgfa Click to copy
  • Raspbian apt-get install ruby-rgfa Click to copy

ruby-rgfa

parse, edit and write GFA format graphs in Ruby

The Graphical Fragment Assembly (GFA) format is a proposed file format to describe the product of a genome sequence assembly process. rgfa implements the proposed specifications for the GFA format described under https://github.com/pmelsted/GFA-spec/blob/master/GFA-spec.md as closely as possible. The library allows one to create an RGFA object from a file in the GFA format or from scratch, to enumerate the graph elements (segments, links, containments, paths and header lines), to traverse the graph (by traversing all links outgoing from or incoming to a segment), to search for elements (e.g. which links connect two segments) and to manipulate the graph (e.g. to eliminate a link or a segment or to duplicate a segment distributing the read counts evenly on the copies).

To install the latest version of gfadiff in your favorite operating system just copy the gfadiff installation command from above and paste it into terminal. It will download and install the latest version of gfadiff 2026 package in your OS.