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Install Add_metadata On A Debian, Ubuntu, Kali And Raspbian

Install Add_metadata On A Debian, Ubuntu, Kali And Raspbian

add_metadata

Biological Observation Matrix (BIOM) format (Python 2)

Maintainer: Debian Med Packaging Team



Section: python

Install add_metadata

  • Debian apt-get install python-biom-format Click to copy
  • Ubuntu apt-get install python-biom-format Click to copy
  • Kali Linux apt-get install python-biom-format Click to copy
  • Raspbian apt-get install python-biom-format Click to copy

python-biom-format

Biological Observation Matrix (BIOM) format (Python 2)

The BIOM file format (canonically pronounced biome) is designed to be a general-use format for representing biological sample by observation contingency tables. BIOM is a recognized standard for the Earth Microbiome Project and is a Genomics Standards Consortium candidate project. The BIOM format is designed for general use in broad areas of comparative -omics. For example, in marker-gene surveys, the primary use of this format is to represent OTU tables: the observations in this case are OTUs and the matrix contains counts corresponding to the number of times each OTU is observed in each sample. With respect to metagenome data, this format would be used to represent metagenome tables: the observations in this case might correspond to SEED subsystems, and the matrix would contain counts corresponding to the number of times each subsystem is observed in each metagenome. Similarly, with respect to genome data, this format may be used to represent a set of genomes: the observations in this case again might correspond to SEED subsystems, and the counts would correspond to the number of times each subsystem is observed in each genome. This package provides the BIOM format library for the Python 2 interpreter.

Installing add_metadata command is simple. just copy one of the above commands for your operating system and paste it into terminal. This command is available for Debian, Ubuntu, Kali and Raspbian operating systems. Once you run the command it will install the latest version of add_metadata 2022 package in your OS.