sga

How To Install Sga?

How To Install Sga?

sga

de novo genome assembler that uses string graphs

Maintainer: Debian Med Packaging Team



Section: science

Install sga

  • Debian apt-get install sga Click to copy
  • Ubuntu apt-get install sga Click to copy
  • Kali Linux apt-get install sga Click to copy
  • Raspbian apt-get install sga Click to copy

sga

de novo genome assembler that uses string graphs

The major goal of SGA is to be very memory efficient, which is achieved by using a compressed representation of DNA sequence reads. SGA is a de novo assembler for DNA sequence reads. It is based on Gene Myers' string graph formulation of assembly and uses the FM-index/Burrows-Wheeler transform to efficiently find overlaps between sequence reads.

Installation of latest sga command is available for Debian, Ubuntu, Kali and Raspbian. You can copy the command for your OS from above and paste it into your terminal. Once you run the command it will download the 2023 latest package from the repository and install it in your computer/server.