How To Install Seqtk On Debian, Ubuntu, Kali, Raspbian And MacOS?

How To Install Seqtk On Debian, Ubuntu, Kali, Raspbian And MacOS?

seqtk

Fast and lightweight tool for processing sequences in the FASTA or FASTQ format

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Maintainer: Debian Med Packaging Team
Email: [email protected] .
Website: https://github.com/lh3/seqtk
Section: science

Install seqtk

  • Debian apt-get install seqtk Click to copy
  • Ubuntu apt-get install seqtk Click to copy
  • Kali Linux apt-get install seqtk Click to copy
  • Raspbian apt-get install seqtk Click to copy
  • macOS brew install seqtk Click to copy

seqtk

Fast and lightweight tool for processing sequences in the FASTA or FASTQ format

Currently, seqtk supports quality based trimming with the phred algorithm, converting fastq to fasta, reverse complementing sequences, extracting or masking subsequences in regions given in a BED/name list file, and more. It contains a subsampling module to sample exactly n sequences or a fraction of sequences. Seqtk supports both fasta and fastq input files, which can be optionally gzip compressed.

Installation of latest seqtk command is available for Debian, Ubuntu, Kali, Raspbian and macOS. You can copy the command for your OS from above and paste it into your terminal. Once you run the command it will download the 2026 latest package from the repository and install it in your computer/server.