How To Install Run_lefse On Debian, Ubuntu, Kali And Raspbian?

run_lefse

determine features of organisms, clades, taxonomic units, genes

Maintainer: Debian Med Packaging Team

Email: [email protected] .

Website: https://bitbucket.org/biobakery/biobakery/wiki/lefse

Section: science

Install run_lefse

Debian apt-get install lefse Click to copy
Ubuntu apt-get install lefse Click to copy
Kali Linux apt-get install lefse Click to copy
Raspbian apt-get install lefse Click to copy

lefse

determine features of organisms, clades, taxonomic units, genes

LEfSe (Linear discriminant analysis Effect Size) determines the features (organisms, clades, operational taxonomic units, genes, or functions) most likely to explain differences between classes by coupling standard tests for statistical significance with additional tests encoding biological consistency and effect relevance.

Install the latest version of run_lefse in Debian, Ubuntu, Kali and Raspbian from terminal. To install the run_lefse just copy the above command for your OS and run into terminal. After you run the command it will grab the latest version of run_lefse from the respository and install it in your computer/server.