How To Install Run-HLA On Debian, Ubuntu, Kali, Fedora, Raspbian And MacOS?

How To Install Run-HLA On Debian, Ubuntu, Kali, Fedora, Raspbian And MacOS?

run-HLA

Burrows-Wheeler Aligner

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Maintainer: Debian Med Packaging Team
Email: [email protected] .
Website: http://bio-bwa.sourceforge.net/
Section: science

Install run-HLA

  • Debian apt-get install bwa Click to copy
  • Ubuntu apt-get install bwa Click to copy
  • Kali Linux apt-get install bwa Click to copy
  • Fedora dnf install bwa Click to copy
  • Raspbian apt-get install bwa Click to copy
  • macOS brew install bwa Click to copy

bwa

Burrows-Wheeler Aligner

BWA is a software package for mapping low-divergent sequences against a large reference genome, such as the human genome. It consists of three algorithms: BWA-backtrack, BWA-SW and BWA-MEM. The first algorithm is designed for Illumina sequence reads up to 100bp, while the rest two for longer sequences ranged from 70bp to 1Mbp. BWA-MEM and BWA-SW share similar features such as long-read support and split alignment, but BWA-MEM, which is the latest, is generally recommended for high-quality queries as it is faster and more accurate. BWA-MEM also has better performance than BWA-backtrack for 70-100bp Illumina reads.

Installation of latest run-HLA command is available for Debian, Ubuntu, Kali, Fedora, Raspbian and macOS. You can copy the command for your OS from above and paste it into your terminal. Once you run the command it will download the 2026 latest package from the repository and install it in your computer/server.