How To Install Re-PCR On Debian, Ubuntu, Kali And Raspbian?

How To Install Re-PCR On Debian, Ubuntu, Kali And Raspbian?

re-PCR

Tool to test a DNA sequence for the presence of sequence tagged sites

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Maintainer: Debian Med Packaging Team
Email: [email protected] .
Website: https://www.ncbi.nlm.nih.gov/tools/epcr/
Section: science

Install re-PCR

  • Debian apt-get install ncbi-epcr Click to copy
  • Ubuntu apt-get install ncbi-epcr Click to copy
  • Kali Linux apt-get install ncbi-epcr Click to copy
  • Raspbian apt-get install ncbi-epcr Click to copy

ncbi-epcr

Tool to test a DNA sequence for the presence of sequence tagged sites

Electronic PCR (e-PCR) is computational procedure that is used to identify sequence tagged sites(STSs), within DNA sequences. e-PCR looks for potential STSs in DNA sequences by searching for subsequences that closely match the PCR primers and have the correct order, orientation, and spacing that could represent the PCR primers used to generate known STSs. The new version of e-PCR implements a fuzzy matching strategy. To reduce likelihood that a true STS will be missed due to mismatches, multiple discontiguous words may be used instead of a single exact word. Each of this word has groups of significant positions separated by 'wildcard' positions that are not required to match. In addition, it is also possible to allow gaps in the primer alignments. The main motivation for implementing reverse searching (called Reverse e-PCR) was to make it feasible to search the human genome sequence and other large genomes. The new version of e-PCR provides a search mode using a query sequence against a sequence database. This program is retired upstream and it is suggested to use Primer-Blast https://www.ncbi.nlm.nih.gov/tools/primer-blast/ instead.

Installation of latest re-PCR command is available for Debian, Ubuntu, Kali and Raspbian. You can copy the command for your OS from above and paste it into your terminal. Once you run the command it will download the 2026 latest package from the repository and install it in your computer/server.