How To Install Plasmidseeker In Debian, Ubuntu And Kali?

plasmidseeker

identification of known plasmids from whole-genome sequencing reads

Maintainer: Debian Med Packaging Team

Email: [email protected] .

Website: https://github.com/bioinfo-ut/PlasmidSeeker

Section: science

Install plasmidseeker

Debian apt-get install plasmidseeker Click to copy
Ubuntu apt-get install plasmidseeker Click to copy
Kali Linux apt-get install plasmidseeker Click to copy

plasmidseeker

identification of known plasmids from whole-genome sequencing reads

PlasmidSeeker is a k-mer based program for the identification of known plasmids from bacterial whole genome sequencing reads. PlasmidSeeker that enables the detection of plasmids from bacterial WGS data without read assembly. The PlasmidSeeker algorithm is based on k-mers and uses k-mer abundance to distinguish between plasmid and bacterial sequences. The performance of PlasmidSeeker was tested on a set of simulated and real bacterial WGS samples, resulting in 100% sensitivity and 99.98% specificity.

To install the latest version of plasmidseeker in your favorite operating system just copy the plasmidseeker installation command from above and paste it into terminal. It will download and install the latest version of plasmidseeker 2024 package in your OS.