How To Install Mgaps On Debian, Ubuntu, Kali And Raspbian?

mgaps

Efficient sequence alignment of full genomes

Maintainer: Debian Med Packaging Team

Email: [email protected] .

Website: http://mummer.sourceforge.net/

Section: science

Install mgaps

Debian apt-get install mummer Click to copy
Ubuntu apt-get install mummer Click to copy
Kali Linux apt-get install mummer Click to copy
Raspbian apt-get install mummer Click to copy

mummer

Efficient sequence alignment of full genomes

MUMmer is a system for rapidly aligning entire genomes, whether in complete or draft form. For example, MUMmer 3.0 can find all 20-basepair or longer exact matches between a pair of 5-megabase genomes in 13.7 seconds, using 78 MB of memory, on a 2.4 GHz Linux desktop computer. MUMmer can also align incomplete genomes; it handles the 100s or 1000s of contigs from a shotgun sequencing project with ease, and will align them to another set of contigs or a genome using the NUCmer program included with the system. If the species are too divergent for DNA sequence alignment to detect similarity, then the PROmer program can generate alignments based upon the six-frame translations of both input sequences.

Install the latest version of mgaps in Debian, Ubuntu, Kali and Raspbian from terminal. To install the mgaps just copy the above command for your OS and run into terminal. After you run the command it will grab the latest version of mgaps from the respository and install it in your computer/server.