How To Install Iqtree-mpi In Debian, Ubuntu And Kali?

How To Install Iqtree-mpi In Debian, Ubuntu And Kali?

iqtree-mpi

efficient phylogenetic software by maximum likelihood

Maintainer: Debian Med Packaging Team



Section: science

Install iqtree-mpi

  • Debian apt-get install iqtree Click to copy
  • Ubuntu apt-get install iqtree Click to copy
  • Kali Linux apt-get install iqtree Click to copy

iqtree

efficient phylogenetic software by maximum likelihood

IQ-TREE is a very efficient maximum likelihood phylogenetic software with following key features among others: * A novel fast and effective stochastic algorithm to estimate maximum likelihood trees. IQ-TREE outperforms both RAxML and PhyML in terms of likelihood while requiring similar amount of computing time (see Nguyen et al., 2015) * An ultrafast bootstrap approximation to assess branch supports (see Minh et al., 2013). * A wide range of substitution models for binary, DNA, protein, codon, and morphological alignments. * Ultrafast model selection for all data types, 10 to 100 times faster than jModelTest and ProtTest. * Finding best partition scheme like PartitionFinder. * Partitioned models with mixed data types for phylogenomic (multi- gene) alignments, allowing for separate, proportional, or joint branch lengths among genes. * Supporting the phylogenetic likelihod library (PLL) (see Flouri et al., 2014)

Installation of latest iqtree-mpi command is available for Debian, Ubuntu and Kali. You can copy the command for your OS from above and paste it into your terminal. Once you run the command it will download the 2026 latest package from the repository and install it in your computer/server.