How To Install Gsnap.nosimd?

How To Install Gsnap.nosimd?

gsnap.nosimd

spliced and SNP-tolerant alignment for mRNA and short reads

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Install gsnap.nosimd

  • Ubuntu apt-get install gmap Click to copy
  • Kali Linux apt-get install gmap Click to copy

gmap

spliced and SNP-tolerant alignment for mRNA and short reads

This package contains the programs GMAP and GSNAP as well as utilities to manage genome databases in GMAP/GSNAP format. GMAP (Genomic Mapping and Alignment Program) is a tool for aligning EST, mRNA and cDNA sequences. GSNAP (Genomic Short-read Nucleotide Alignment Program) is a tool for aligning single-end and paired-end transcriptome reads. Both tools can use a database of * known splice sites and identify novel splice sites. * known single-nucleotide polymorphisms (SNPs). GSNAP can align bisulfite-treated DNA.

To install the latest version of gsnap.nosimd in your favorite operating system just copy the gsnap.nosimd installation command from above and paste it into terminal. It will download and install the latest version of gsnap.nosimd 2023 package in your OS.