How To Install Fastaoverlap?

How To Install Fastaoverlap?

fastaoverlap

generic tool for pairwise sequence comparison

Maintainer: Debian Med Packaging Team



Section: science

Install fastaoverlap

  • Debian apt-get install exonerate Click to copy
  • Ubuntu apt-get install exonerate Click to copy
  • Kali Linux apt-get install exonerate Click to copy
  • Fedora dnf install exonerate Click to copy
  • Raspbian apt-get install exonerate Click to copy

exonerate

generic tool for pairwise sequence comparison

Exonerate allows you to align sequences using a many alignment models, using either exhaustive dynamic programming, or a variety of heuristics. Much of the functionality of the Wise dynamic programming suite was reimplemented in C for better efficiency. Exonerate is an intrinsic component of the building of the Ensembl genome databases, providing similarity scores between RNA and DNA sequences and thus determining splice variants and coding sequences in general. An In-silico PCR Experiment Simulation System (see the ipcress man page) is packaged with exonerate. This package also comes with a selection of utilities for performing simple manipulations quickly on fasta files beyond 2Gb

Installation of latest fastaoverlap command is available for Debian, Ubuntu, Kali, Fedora and Raspbian. You can copy the command for your OS from above and paste it into your terminal. Once you run the command it will download the 2024 latest package from the repository and install it in your computer/server.