Fastq_masker Installation On A Debian, Ubuntu, Kali, Fedora And Raspbian

fastq_masker

FASTQ/A short nucleotide reads pre-processing tools

Maintainer: Debian Med Packaging Team

Email: [email protected] .

Website: http://hannonlab.cshl.edu/fastx_toolkit/

Section: science

Install fastq_masker

Debian apt-get install fastx-toolkit Click to copy
Ubuntu apt-get install fastx-toolkit Click to copy
Kali Linux apt-get install fastx-toolkit Click to copy
Fedora dnf install fastx_toolkit Click to copy
Raspbian apt-get install fastx-toolkit Click to copy

fastx-toolkit

FASTQ/A short nucleotide reads pre-processing tools

The FASTX-Toolkit is a collection of command line tools for preprocessing short nucleotide reads in FASTA and FASTQ formats, usually produced by Next-Generation sequencing machines. The main processing of such FASTA/FASTQ files is mapping (aligning) the sequences to reference genomes or other databases using specialized programs like BWA, Bowtie and many others. However, it is sometimes more productive to preprocess the FASTA/FASTQ files before mapping the sequences to the genomeu2014manipulating the sequences to produce better mapping results. The FASTX-Toolkit tools perform some of these preprocessing tasks.

fastx_toolkit

files

Install the latest version of fastq_masker in Debian, Ubuntu, Kali, Fedora and Raspbian from terminal. To install the fastq_masker just copy the above command for your OS and run into terminal. After you run the command it will grab the latest version of fastq_masker from the respository and install it in your computer/server.