CreateGermlines.py

Repertoire clonal assignment toolkit (Python 3)

Maintainer: Debian Med Packaging Team

Email: [email protected] .

Website: https://changeo.readthedocs.io

Section: science

Install CreateGermlines.py

Debian apt-get install changeo Click to copy
Ubuntu apt-get install changeo Click to copy
Kali Linux apt-get install changeo Click to copy

changeo

Repertoire clonal assignment toolkit (Python 3)

Change-O is a collection of tools for processing the output of V(D)J alignment tools, assigning clonal clusters to immunoglobulin (Ig) sequences, and reconstructing germline sequences. Dramatic improvements in high-throughput sequencing technologies now enable large-scale characterization of Ig repertoires, defined as the collection of trans-membrane antigen-receptor proteins located on the surface of B cells and T cells. Change-O is a suite of utilities to facilitate advanced analysis of Ig and TCR sequences following germline segment assignment. Change-O handles output from IMGT/HighV-QUEST and IgBLAST, and provides a wide variety of clustering methods for assigning clonal groups to Ig sequences. Record sorting, grouping, and various database manipulation operations are also included. This package installs the library for Python 3.

Installing CreateGermlines.py command is simple. just copy one of the above commands for your operating system and paste it into terminal. This command is available for Debian, Ubuntu and Kali operating systems. Once you run the command it will install the latest version of CreateGermlines.py 2026 package in your OS.